Structure of PDB 7coq Chain C Binding Site BS01

Receptor Information
>7coq Chain C (length=584) Species: 768486 (Enterococcus hirae ATCC 9790) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MQIGKIIKVSGPLVMAENMSEASIQDMCLVGDLGVIGEIIEMRQDVASIQ
VYEETSGIGPGEPVRSTGEALSVELGPGIISQMFDGIQRPLDTFMEVTQS
NFLGRGVQLPALDHEKQWWFEATIEEGTEVSAGDIIGYVDETKIIQHKIM
VPNGIKGTVQKIESGSFTIDDPICVIETEQGLKELTMMQKWPVRRGRPIK
QKLNPDVPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTVVQHQIAKWSD
VDLVVYVGCGERGNEMTDVVNEFPELIDPNTGESLMERTVLIANTSNMPV
AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPG
DEGYPAYLGSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEP
VTQNTLRVVKVFWGLDSSLAQKRHFPSINWIQSYSLYSTEVGRYMDQILQ
QDWSDMVTEGMRILQEEEQLNEIVRLVGIDSLSDNDRLTLEVAKSIREDY
LQQNAFDDVDTFTSREKQFNMLKVILTFGKEARKALSLGAYFNEIMEGTV
AVRERISRSKYIPEEELAKISSINEEIKETIQLI
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain7coq Chain C Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7coq De Novo Design of Allosteric Control into Rotary Motor V1-ATPase by Restoring Lost Function
Resolution3.44 Å
Binding residue
(original residue number in PDB)
T239 E265
Binding residue
(residue number reindexed from 1)
T239 E265
Annotation score1
Enzymatic activity
Enzyme Commision number 7.2.2.1: Na(+)-transporting two-sector ATPase.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0046932 sodium-transporting ATP synthase activity, rotational mechanism
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 proton-transporting ATPase activity, rotational mechanism
GO:0046962 sodium-transporting ATPase activity, rotational mechanism
Biological Process
GO:0006814 sodium ion transport
GO:0035725 sodium ion transmembrane transport
GO:0042777 proton motive force-driven plasma membrane ATP synthesis
GO:0046034 ATP metabolic process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0045259 proton-transporting ATP synthase complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7coq, PDBe:7coq, PDBj:7coq
PDBsum7coq
PubMed
UniProtQ08636|NTPA_ENTHA V-type sodium ATPase catalytic subunit A (Gene Name=ntpA)

[Back to BioLiP]