Structure of PDB 7b3n Chain C Binding Site BS01

Receptor Information
>7b3n Chain C (length=168) Species: 456163 (Thermus parvatiensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AYIVLDPGHGGQDPGAVAPDGTREADLNLAQALTLKEYLVALGYRVGFTR
TSDVYVPLSERIAMARRMGARLFISVHHDTPTASRPGVYYSPHPGSEELA
RTVAAALGEGAWVRPSSASRFGRLYIDDFPGPAILVEFGPTRPISRAERI
ARAQAVASPIAEFARRWT
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7b3n Chain C Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7b3n AmiP from hyperthermophilic Thermus parvatiensis prophage is a thermoactive and ultrathermostable peptidoglycan lytic amidase.
Resolution1.793 Å
Binding residue
(original residue number in PDB)		H17 E32 H85
Binding residue
(residue number reindexed from 1)		H9 E24 H77
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0009253 peptidoglycan catabolic process
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7b3n, PDBe:7b3n, PDBj:7b3n
PDBsum7b3n
PubMed36721347
UniProtH7GE39

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