Structure of PDB 6zla Chain C Binding Site BS01
Receptor Information
>6zla Chain C (length=305) Species:
1396
(Bacillus cereus) [
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MKILVTGAAGFIGSHLCQALLKNSAYHVVGIDHFIGPTPATLKTGNIQSL
ELNSRFQFIREDILNTDLSKLLQDIDVVYHLAAIPGWGKDFQPYVTNNIM
VTQQLLEACKHIKLDKFIHISTSSVYGEKSGAVSEDLLPIPLSPYGVTKL
SGEHLCHVYHKNFHIPIVILRYFTVYGPRQRPDMAFHRLIKQMLEDKPLT
IFGDGTQTRDFTYIDDCIRGTVAALETKKNIIGEVINIGGKEQASILDII
SMLEKISGKSATKNFLKKQTWADISKASTLLQYSPTVSLSDGLEAEYDYI
KQLYK
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
6zla Chain C Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6zla
Crystallographic snapshots of UDP-glucuronic acid 4-epimerase ligand binding, rotation, and reduction.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
G7 G10 F11 I12 D32 H33 F34 I35 K43 D62 I63 L81 A82 A83 I124 T126 Y149 K153 Y176 V179 R185 M188
Binding residue
(residue number reindexed from 1)
G7 G10 F11 I12 D32 H33 F34 I35 K43 D62 I63 L81 A82 A83 I120 T122 Y145 K149 Y172 V175 R181 M184
Annotation score
4
External links
PDB
RCSB:6zla
,
PDBe:6zla
,
PDBj:6zla
PDBsum
6zla
PubMed
32661196
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