Structure of PDB 6ygh Chain C Binding Site BS01

Receptor Information
>6ygh Chain C (length=191) Species: 489543 (Hepatitis B virus duck/DHBV-16) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DINASRALANVYDLPDDFFPKIDDLVRDAKDALEPYWKSDSIKKHVLIAT
HFVDLIEDFWQTTQGMHEIAESLRAVIPPTTTPVPPGYLIQHEEAEEIPL
GDLFKHQEERIVSFQPDYPITARIHAHLKAYAKINEESLDRARRLLWWHY
NCLLWGEAQVTNYISRLRTWLSTPEKYRGRDAPTIEAITRP
Ligand information
>6ygh Chain H (length=13) Species: 489543 (Hepatitis B virus duck/DHBV-16) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
SSSSHHRSPSPRK
Receptor-Ligand Complex Structure
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PDB6ygh Slowly folding surface extension in the prototypic avian hepatitis B virus capsid governs stability.
Resolution3.7 Å
Binding residue
(original residue number in PDB)		W38 D41
Binding residue
(residue number reindexed from 1)		W37 D40
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
GO:0075732 viral penetration into host nucleus
Cellular Component
GO:0030430 host cell cytoplasm
GO:0039619 T=4 icosahedral viral capsid
GO:0043657 host cell

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ygh, PDBe:6ygh, PDBj:6ygh
PDBsum6ygh
PubMed32795390
UniProtP0C6J7|CAPSD_DHBV1 Capsid protein (Gene Name=C)

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