Structure of PDB 6v1s Chain C Binding Site BS01

Receptor Information
>6v1s Chain C (length=265) Species: 1496 (Clostridioides difficile) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DNIPDSYERNGYTIKDLIAVKWEDSFAEQGYKKYVSNYLESNTAGDPYTD
YEKASGSFDKAIKTEARDPLVAAYPIVGVGMEKLIISTNENKGESAYINA
NVRYYNTGTAPMYKVTPTTNLVLDGDTLSTIKAQENQIGNNLSPGDTYPK
KGLSPLALNTMDQFSSRLIPINYDQLKKLDAGKQIKLETTQVSGNFGTKN
SSGQIVTEGNSWSDYISQIDSISASIILDTENESYERRVTAKNLQDPEDK
TPELTIGEAIEKAFG
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6v1s Chain C Residue 901 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6v1s Structural elucidation of theClostridioides difficiletransferase toxin reveals a single-site binding mode for the enzyme.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		D224 E231 N260 E263 D273
Binding residue
(residue number reindexed from 1)		D1 E8 N37 E40 D50
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005576 extracellular region

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Biological Process
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Cellular Component
External links
PDB RCSB:6v1s, PDBe:6v1s, PDBj:6v1s
PDBsum6v1s
PubMed32123082
UniProtA8DS70

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