Structure of PDB 6sz9 Chain C Binding Site BS01
Receptor Information
>6sz9 Chain C (length=202) Species:
446
(Legionella pneumophila) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RCELKLIASPGSWRLYSARKIDERFKSYEQKIFQRDRYTCQFCGFQARLY
QDIVNLDGDYTNNRLSNLVTACCFCAQCFFVESVGVGGYGGGTLIYLPEL
TQAELNSLCHVLFCAITNDTGYKSSAQNIYRSFKFRSQIVEEKFGEGTSD
PAIFGQLMIDSGVNSEEIREKLFKNIRLLPSRAKFRKQIEKWAASALEEI
AD
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
6sz9 Chain C Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6sz9
Mechanism of effector capture and delivery by the type IV secretion system from Legionella pneumophila.
Resolution
3.7 Å
Binding residue
(original residue number in PDB)
C46 C49 C78 C81
Binding residue
(residue number reindexed from 1)
C40 C43 C72 C75
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
Biological Process
GO:0015031
protein transport
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6sz9
,
PDBe:6sz9
,
PDBj:6sz9
PDBsum
6sz9
PubMed
32513920
UniProt
Q5ZYB7
|DOTN_LEGPH Type 4 apparatus protein DotN (Gene Name=dotN)
[
Back to BioLiP
]