Structure of PDB 6sne Chain C Binding Site BS01
Receptor Information
>6sne Chain C (length=212) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DIQMTQSPSSLSASVGDKVTITCRASQSVTKYLNWYQFKTGQAPRILIYG
TYTLLSGVSPRFSGAGSGSLYTLTITNIQPEDFATYYCQQAHSTPWTFGQ
GTHVAANRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRG
Ligand information
Ligand ID
PC
InChI
InChI=1S/C5H14NO4P/c1-6(2,3)4-5-10-11(7,8)9/h4-5H2,1-3H3,(H-,7,8,9)/p+1
InChIKey
YHHSONZFOIEMCP-UHFFFAOYSA-O
SMILES
Software
SMILES
ACDLabs 10.04
O=P(O)(O)OCC[N+](C)(C)C
CACTVS 3.341
C[N+](C)(C)CCO[P](O)(O)=O
OpenEye OEToolkits 1.5.0
C[N+](C)(C)CCOP(=O)(O)O
Formula
C5 H15 N O4 P
Name
PHOSPHOCHOLINE
ChEMBL
CHEMBL1235161
DrugBank
DB03945
ZINC
ZINC000001532692
PDB chain
6sne Chain C Residue 302 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6sne
Structural Basis for Broad HIV-1 Neutralization by the MPER-Specific Human Broadly Neutralizing Antibody LN01.
Resolution
3.9 Å
Binding residue
(original residue number in PDB)
T30 K31
Binding residue
(residue number reindexed from 1)
T30 K31
Annotation score
4
External links
PDB
RCSB:6sne
,
PDBe:6sne
,
PDBj:6sne
PDBsum
6sne
PubMed
31653484
[
Back to BioLiP
]