Structure of PDB 6sln Chain C Binding Site BS01

Receptor Information
>6sln Chain C (length=481) Species: 242619 (Porphyromonas gingivalis W83) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CELDRDPEGKDFQQPYTSFVQTKQNRDGLYALLRNTENPRMHFYQELQSD
MYCTTITDGNSLAPFVNWDLGILNDHGRADEDEVSGIAGYYFVYNRLNQQ
ANAFVNNTEAALQNQVYKNSTEIANAKSFLAEGKVLQALAIWRLMDRFSF
HESVTEVNSGAKDLGVILLKEYNPGYIGPRATKAQCYDYILSRLSEAIEV
LPENRESVLYVSRDYAYALRARIYLALGEYGKAAADAKMVVDKYPLIGAA
DASEFENIYRSDANNPEIIFRGFASATLGSFTATTLNGAAPAGKDIKYNP
SAVPFQWVVDLYENEDFRKSVYIAKVVKKDKGYLVNKFLEDKAYRDVQDK
PNLKVGARYFSVAEVYLILVESALQTGDTPTAEKYLKALSKARGAEVSVV
NMEALQAERTRELIGEGSRLRDMVRWSIPNNHDAFETQPGLEGFANTTPL
KAQAPVGFYAYTWEFPQRDRQTNPQLIKNWP
Ligand information
>6sln Chain P (length=13) Species: 242619 (Porphyromonas gingivalis W83) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
QTAGANSQRGSAG
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6sln Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Resolution2.61 Å
Binding residue
(original residue number in PDB)
G78 N79
Binding residue
(residue number reindexed from 1)
G59 N60
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6sln, PDBe:6sln, PDBj:6sln
PDBsum6sln
PubMed32393857
UniProtF5H948

[Back to BioLiP]