Structure of PDB 6jxd Chain C Binding Site BS01
Receptor Information
>6jxd Chain C (length=107) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAE
ILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNI
QAVLLPK
Ligand information
>6jxd Chain I (length=147) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
catatatcccggtgccgaggccgctcaattggtcgtagacagctctagca
ccgcttaaacgcacgtacgcgctgtctaccgcgttttaaccgccactaga
agcgcttactagtctccaggcacgtgtgagaccggcatatatggtac
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6jxd
PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Resolution
2.25 Å
Binding residue
(original residue number in PDB)
R12 K13 A14 R17 R20 R32 R42 R77
Binding residue
(residue number reindexed from 1)
R1 K2 A3 R6 R9 R21 R31 R66
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:6jxd
,
PDBe:6jxd
,
PDBj:6jxd
PDBsum
6jxd
PubMed
31848352
UniProt
P04908
|H2A1B_HUMAN Histone H2A type 1-B/E (Gene Name=H2AC4)
[
Back to BioLiP
]