Structure of PDB 6hmj Chain C Binding Site BS01

Receptor Information
>6hmj Chain C (length=355) Species: 479431 (Nakamurella multipartita DSM 44233) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SFGSFVLDAGSARFVGSDELALVLGFAPGDVVLTPAVVLAHLHPDDRLEW
QAGLQRCLATGRPVVVNHLLLTAEAEPRPAMTTLTALVRAVTGVITDLSD
RVRRATEAEIRQAVRAAAATRSEIDQAKGIVMAAFDVDADQAFALLKWHS
SQSNRKLRDLATGMIEGLAAANSALPLRRRLSTVFTDMGCPAPSTKGWTV
PVTLPPTSGLIPTALLPGILTRAAHDASVAITVADVTAPDQPLVYANPAF
ERLTGYAAAEVLGRNCRFLQAESGDPHERSAIRSAIANGDAVTTLIRNFR
QDGHAFWNEFHLSPVRNGAGRVTHYIGYQLDVTERVERDQQLEQLASLEH
HHHHH
Ligand information
Ligand IDFMN
InChIInChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)/t11-,12+,14-/m0/s1
InChIKeyFVTCRASFADXXNN-SCRDCRAPSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)O)O)O)O
OpenEye OEToolkits 1.7.6Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
ACDLabs 12.01N=2C(=O)NC(=O)C3=Nc1cc(C)c(C)cc1N(C=23)CC(O)C(O)C(O)COP(=O)(O)O
CACTVS 3.385Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)c2cc1C
CACTVS 3.385Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)c2cc1C
FormulaC17 H21 N4 O9 P
NameFLAVIN MONONUCLEOTIDE;
RIBOFLAVIN MONOPHOSPHATE
ChEMBLCHEMBL1201794
DrugBankDB03247
ZINCZINC000003831425
PDB chain6hmj Chain C Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6hmj A blue light receptor that mediates RNA binding and translational regulation.
Resolution2.51 Å
Binding residue
(original residue number in PDB)		N283 C284 R285 L287 Q288 R297 I300 R301 I314 N316 F328 L330 Y343 Q347
Binding residue
(residue number reindexed from 1)		N265 C266 R267 L269 Q270 R279 I282 R283 I296 N298 F310 L312 Y325 Q329
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:6hmj, PDBe:6hmj, PDBj:6hmj
PDBsum6hmj
PubMed31451761
UniProtC8XJT7

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