Structure of PDB 6fi9 Chain C Binding Site BS01

Receptor Information
>6fi9 Chain C (length=144) Species: 416870 (Lactococcus cremoris subsp. cremoris MG1363) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ALRNQIEQFLGAIMQFAENKHEILLGECESNVKLTSTQEHILMILAAEVS
TNARIAEQLKISPAAVTKALKKLQEQELIKSSRATNDERVVLWSLTEKAI
PVAKEHAAHHEKTLSTYQELGDKFTDEEQKVISQFLSVLTEEFR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6fi9 Chain C Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6fi9 Biophysical and structural characterization of a zinc-responsive repressor of the MarR superfamily.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		E23 H41 H107 H111
Binding residue
(residue number reindexed from 1)		E22 H40 H106 H110
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6fi9, PDBe:6fi9, PDBj:6fi9
PDBsum6fi9
PubMed30753183
UniProtA2RNS2|ZITR_LACLM Transcriptional regulator ZitR (Gene Name=zitR)

[Back to BioLiP]