Structure of PDB 6esq Chain C Binding Site BS01

Receptor Information
>6esq Chain C (length=392) Species: 2186 (Methanothermococcus thermolithotrophicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MRDVAIIGYGQTKFGELWEDSFRDLIVEAGVKAIKDANVDGGDIDAMYIG
NMSGGLFVGQEHIASLIADHAGLNPVPCTRVEAACASGSLALRSAVLSVA
SGHHDVVLAGGVEKMTDVEDATAAIASASDQEWEAFFGATFPSLYAMMAR
RYMYQYGLTIEELSMWSVIAHENATKNKYAQFGFKTTLEQVMNASPVADP
LTLMHCSPVSDGASALIVCDADKAEEFAPKDEIIYIKASTQASDTIALHD
REDMTTLNAAKVASEKAYKLAKIAPEKIDVAEVHDCFAINGLILVEDLGF
CKKGDAGKVIDEGKIRIDYDDFVTVNPSGGLKAAGHALGATGIRQVGELY
WQLKQDKECKDRQATIKNGYGIAANVGGTGGTVCVHLLSDKR
Ligand information
Ligand IDCOA
InChIInChI=1S/C21H36N7O16P3S/c1-21(2,16(31)19(32)24-4-3-12(29)23-5-6-48)8-41-47(38,39)44-46(36,37)40-7-11-15(43-45(33,34)35)14(30)20(42-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-31,48H,3-8H2,1-2H3,(H,23,29)(H,24,32)(H,36,37)(H,38,39)(H2,22,25,26)(H2,33,34,35)/t11-,14-,15-,16+,20-/m1/s1
InChIKeyRGJOEKWQDUBAIZ-IBOSZNHHSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCS)O
CACTVS 3.341CC(C)(CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCS
OpenEye OEToolkits 1.5.0CC(C)(CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCS)O
CACTVS 3.341CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCS
ACDLabs 10.04O=C(NCCS)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O
FormulaC21 H36 N7 O16 P3 S
NameCOENZYME A
ChEMBLCHEMBL1213327
DrugBankDB01992
ZINCZINC000008551087
PDB chain6esq Chain C Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6esq Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site.
Resolution2.95 Å
Binding residue
(original residue number in PDB)		F182 L203 M204 C206 S207 P208 V209 K332
Binding residue
(residue number reindexed from 1)		F182 L203 M204 C206 S207 P208 V209 K332
Annotation score3
Enzymatic activity
Enzyme Commision number 2.3.1.9: acetyl-CoA C-acetyltransferase.
Gene Ontology
Molecular Function
GO:0003985 acetyl-CoA C-acetyltransferase activity
GO:0016746 acyltransferase activity
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups

View graph for
Molecular Function
External links
PDB RCSB:6esq, PDBe:6esq, PDBj:6esq
PDBsum6esq
PubMed29531083
UniProtA0A384E138

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