Structure of PDB 6ceq Chain C Binding Site BS01
Receptor Information
>6ceq Chain C (length=111) Species:
666
(Vibrio cholerae) [
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AVEGMTTNLMMADKEGIIQYLNPALLQLLTHREPELAQAFPGFKAAELVG
KNIDIFHKNPAHQRSIISNPERLPFTSMIKVGSLEFNLTCIAMRDTKGEY
IGPALQLVDIT
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
6ceq Chain C Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6ceq
THE AER2 RECEPTOR FROM VIBRIO CHOLERAE IS A DUAL PAS-HEME OXYGEN SENSOR.
Resolution
1.67 Å
Binding residue
(original residue number in PDB)
M179 I222 F225 H226 K227 H231 Q232 F244 S246 I248 L257 L274
Binding residue
(residue number reindexed from 1)
M10 I53 F56 H57 K58 H62 Q63 F75 S77 I79 L88 L105
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6ceq
,
PDBe:6ceq
,
PDBj:6ceq
PDBsum
6ceq
PubMed
29719085
UniProt
Q9KKL2
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