Structure of PDB 6c89 Chain C Binding Site BS01
Receptor Information
>6c89 Chain C (length=228) Species:
562
(Escherichia coli) [
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DQRFGDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTA
WTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYAN
ALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKVFYPGPGHTSD
NITVGIDGTDIAFGGCLIRDSKAKSLAQLGDADTEHYAASARAFGAAFPK
ASMIVMSHSAPDSRAAITHTARMADKLR
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
6c89 Chain C Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6c89
Differential active site requirements for NDM-1 beta-lactamase hydrolysis of carbapenem versus penicillin and cephalosporin antibiotics.
Resolution
1.75006 Å
Binding residue
(original residue number in PDB)
D120 C221 H263
Binding residue
(residue number reindexed from 1)
D82 C166 H208
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H116 H118 D120 H196 C221 R224 Q233 H263
Catalytic site (residue number reindexed from 1)
H78 H80 D82 H147 C166 R169 Q178 H208
Enzyme Commision number
3.5.2.6
: beta-lactamase.
External links
PDB
RCSB:6c89
,
PDBe:6c89
,
PDBj:6c89
PDBsum
6c89
PubMed
30375382
UniProt
E5KIY2
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