Structure of PDB 5zfr Chain C Binding Site BS01

Receptor Information

>5zfr Chain C (length=386) Species: 243231 (Geobacter sulfurreducens PCA) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

DAPVVKLVNLILTDAIKKKASDIHIEPYERTFRVRYRIDGVLYEVMKPPL
KLKNAITSRIKIMADLDIAERRLPQDGRIKIKMGDMDYRVSVLPTLFGEK
VVLRLLDKSNLQLDMTKLGYEPTALSYFKEAIHKPFGMVLVTGPTGSGKT
VSLYSALSELNKTTENISTAEDPVEFNFAGINQVQMHEDIGLTFAAALRS
FLRQDPDIIMIGEIRDFETAEIAIKAALTGHLVLSTLHTNDAPATINRLL
NMGVEPFLVASAVNLITAQRLARRVCSECKAVEEIPIQALIDAGVPPEEA
PEYVCFRGTGCAKCNNTGYKGRVGFYQVMPMLEEIRELILNGANTAEIKR
ESMRLGIKTMRQSGLTKLKEGVTSFEEVLRVTVADD

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

5zfr Chain C Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5zfr Structural insights into the mechanism of Type IVa pilus extension and retraction ATPase motors
Resolution	3.1 Å
Binding residue (original residue number in PDB)	C458 C461 C493 C496
Binding residue (residue number reindexed from 1)	C276 C279 C311 C314
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0000166	nucleotide binding
GO:0003674	molecular_function
GO:0016887	ATP hydrolysis activity
GO:0046872	metal ion binding

	Biological Process
GO:0009297	pilus assembly

	Cellular Component
GO:0005737	cytoplasm
GO:0005886	plasma membrane

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:5zfr, PDBe:5zfr, PDBj:5zfr
PDBsum	5zfr
PubMed	30066435
UniProt	Q74D28

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