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Receptor Information

>5xfm Chain C (length=632) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

HMELQDVVVKGPDEKLQLAVFVQNETKPCYSVSYNGKTMLEKSPLGMNTN
IGDFTKNLKLTGHSVDKIDTVYQQTRIKVSNVHYRANELTCHLENEQGQK
LGVIFRVSDNDVAFRYTLPHQGGKASVTVKEEQTGFRFPEQTTTFLCPQS
DAMIGWKRTKPSYEEEYKADAPMSDRSQYGHGYTFPCLFRIGNDGWVLVS
ETGVDSRYCGSRLSDVSEGNLYTVAFPMAEENNGNGTVAPAFALPGATPW
RTITVGDHLKPIVETTVPWDVVSPLYETKHDYRFGRGTWSWILWQDGSIN
YDDQVRYIDFASAMGYEYALIDNWWDTRIGHQRMKSLVEYARDKGVELFL
WYSSSGYWNDIEQGPVNRMDNAIIRKREMKWLQSLGVKGIKVDFFGGDKQ
ETMRLYEDILSDADDHGLMVIFHGCTLPRGWERMYPNYVGSEAVLASENM
VFNQHFCDEEAFNTCLHPFIRNTVGSMEFGGCLLNKRLNRNNDGGTTRRT
TDVFQLATTVLLQNPVQNFALAPNNLKDVPAVCMDFMKRVPTTWDETRFV
DGYPGKYVVLARRQGDTWYLAAVNAGKEPLKLKLDLEMFAGKTVALYKDD
KKGEPELTSLKVKENGKVQLEIRPQGGILCIK

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

5xfm Chain C Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5xfm A novel glycoside hydrolase family 97 enzyme: Bifunctional beta-l-arabinopyranosidase/ alpha-galactosidase from Bacteroides thetaiotaomicron.
Resolution	2.3 Å
Binding residue (original residue number in PDB)	E179 E457 E463
Binding residue (residue number reindexed from 1)	E164 E442 E448
Annotation score	4

Enzyme Commision number

	Molecular Function
GO:0016798	hydrolase activity, acting on glycosyl bonds
GO:0030246	carbohydrate binding
GO:0046872	metal ion binding

PDB	RCSB:5xfm, PDBe:5xfm, PDBj:5xfm
PDBsum	5xfm
PubMed	28804002
UniProt	Q8A1K0

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Structure of PDB 5xfm Chain C Binding Site BS01