Structure of PDB 5wwj Chain C Binding Site BS01

Receptor Information
>5wwj Chain C (length=274) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFG
CDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAA
HVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRW
Ligand information
>5wwj Chain F (length=7) Species: 1774282 (Influenza A virus (A/chicken/China/028/2014(H7N9))) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
LYKKMTF
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5wwj Crystal Structure of HLA-A*2402 in complex with avian influenza A(H7N9) virus-derived peptide H7-25 (data set 1).
Resolution2.29 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 H70 N77 I80 Y84 F99 Y123 T143 K146 W147 Q156 Y159 T163 G167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E63 K66 H70 N77 I80 Y84 F99 Y123 T143 K146 W147 Q156 Y159 T163 G167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5wwj, PDBe:5wwj, PDBj:5wwj
PDBsum5wwj
PubMed
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

[Back to BioLiP]