Structure of PDB 5uht Chain C Binding Site BS01
Receptor Information
>5uht Chain C (length=237) Species:
243274
(Thermotoga maritima MSB8) [
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LKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLE
VIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEF
ASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKY
VKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTG
LGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
5uht Chain C Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
5uht
A pH-gated conformational switch regulates the phosphatase activity of bifunctional HisKA-family histidine kinases.
Resolution
2.68 Å
Binding residue
(original residue number in PDB)
N380 K383 Y384 I416 I424 R430 G441 G443 L446 F472
Binding residue
(residue number reindexed from 1)
N137 K140 Y141 I173 I181 R187 G198 G200 L203 F229
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.7.13.3
: histidine kinase.
Gene Ontology
Molecular Function
GO:0000155
phosphorelay sensor kinase activity
GO:0016772
transferase activity, transferring phosphorus-containing groups
Biological Process
GO:0007165
signal transduction
GO:0016310
phosphorylation
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:5uht
,
PDBe:5uht
,
PDBj:5uht
PDBsum
5uht
PubMed
29235472
UniProt
Q9WZV7
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