Structure of PDB 5t0w Chain C Binding Site BS01

Receptor Information
>5t0w Chain C (length=229) Species: 32630 (synthetic construct) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
STLDEIMKRGTLRVGTDADYKPFSFKDKNGQYTGFDIDLAKALAKELGVK
VEFVPTTWDGIIPALQTGKFDIVMSGMTITPERKKKVDFSDPYMTAGQTI
LVKKDNADKIKSFEDLNKPDVKVAVQLGTTSEQAAKEFLPKAKIRTFENN
AEAFQEVVSGRADAMVTDSPVAAYYAKLAVVVVDEPFTHEPLGFAIRKGD
PELLNWVNNWLKQMKKDGTYDKLYEKWFK
Ligand information
Ligand IDARG
InChIInChI=1S/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/p+1/t4-/m0/s1
InChIKeyODKSFYDXXFIFQN-BYPYZUCNSA-O
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(CC(C(=O)O)N)CNC(=[NH2+])N
CACTVS 3.341N[C@@H](CCCNC(N)=[NH2+])C(O)=O
OpenEye OEToolkits 1.5.0C(C[C@@H](C(=O)O)N)CNC(=[NH2+])N
CACTVS 3.341N[CH](CCCNC(N)=[NH2+])C(O)=O
ACDLabs 10.04O=C(O)C(N)CCCN\C(=[NH2+])N
FormulaC6 H15 N4 O2
NameARGININE
ChEMBL
DrugBank
ZINC
PDB chain5t0w Chain C Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5t0w To be published
Resolution2.59 Å
Binding residue
(original residue number in PDB)		D30 Y33 W71 S88 G89 T91 R96 Q139 T142 T143 D181
Binding residue
(residue number reindexed from 1)		D17 Y20 W58 S75 G76 T78 R83 Q126 T129 T130 D168
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 20:37:27 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '5t0w', asym_id = 'C', bs = 'BS01', title = 'To be published'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='5t0w', asym_id='C', bs='BS01', title='To be published')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0015276,0016020', uniprot = '', pdbid = '5t0w', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0015276,0016020', uniprot='', pdbid='5t0w', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>