Structure of PDB 5q1a Chain C Binding Site BS01
Receptor Information
>5q1a Chain C (length=229) Species:
9606
(Homo sapiens) [
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MELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEAFSAEENFLILTEMAT
NHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPS
GHSDLLEARIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILS
PDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRT
FNHHHAEMLMSWRVNDHKFTPLLCEIWDV
Ligand information
>5q1a Chain D (length=10) Species:
9606
(Homo sapiens) [
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HQLLRYLLDK
Receptor-Ligand Complex Structure
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PDB
5q1a
D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
V303 K307 E318 I321 K325 P467 L468 E471
Binding residue
(residue number reindexed from 1)
V57 K61 E72 I75 K79 P221 L222 E225
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004879
nuclear receptor activity
GO:0032052
bile acid binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0038183
bile acid signaling pathway
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Molecular Function
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Biological Process
External links
PDB
RCSB:5q1a
,
PDBe:5q1a
,
PDBj:5q1a
PDBsum
5q1a
PubMed
29204945
UniProt
Q96RI1
|NR1H4_HUMAN Bile acid receptor (Gene Name=NR1H4)
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