Structure of PDB 5q16 Chain C Binding Site BS01
Receptor Information
>5q16 Chain C (length=230) Species:
9606
(Homo sapiens) [
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MELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEAFSAEENFLILTEMAT
NHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPS
GHSDLLEARIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILS
PDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRT
FNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
Ligand information
>5q16 Chain D (length=9) Species:
9606
(Homo sapiens) [
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QLLRYLLDK
Receptor-Ligand Complex Structure
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PDB
5q16
D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
V303 K307 H317 Q320 P467 L468 E471
Binding residue
(residue number reindexed from 1)
V57 K61 H71 Q74 P221 L222 E225
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004879
nuclear receptor activity
GO:0032052
bile acid binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0038183
bile acid signaling pathway
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Molecular Function
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Biological Process
External links
PDB
RCSB:5q16
,
PDBe:5q16
,
PDBj:5q16
PDBsum
5q16
PubMed
29204945
UniProt
Q96RI1
|NR1H4_HUMAN Bile acid receptor (Gene Name=NR1H4)
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