Structure of PDB 5ojj Chain C Binding Site BS01
Receptor Information
>5ojj Chain C (length=149) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKL
EVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLN
IATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
5ojj Chain C Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5ojj
Mind the Metal: A Fragment Library-Derived Zinc Impurity Binds the E2 Ubiquitin-Conjugating Enzyme Ube2T and Induces Structural Rearrangements.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
C86 K91
Binding residue
(residue number reindexed from 1)
C83 K88
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
C86
Catalytic site (residue number reindexed from 1)
C83
Enzyme Commision number
2.3.2.23
: E2 ubiquitin-conjugating enzyme.
External links
PDB
RCSB:5ojj
,
PDBe:5ojj
,
PDBj:5ojj
PDBsum
5ojj
PubMed
28933844
UniProt
Q9NPD8
|UBE2T_HUMAN Ubiquitin-conjugating enzyme E2 T (Gene Name=UBE2T)
[
Back to BioLiP
]