Structure of PDB 5o68 Chain C Binding Site BS01

Receptor Information

>5o68 Chain C (length=262) Species: 452680 (Pseudomonas sp. UK4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PAQSVSNLYNEASGFFGNGKFSFETGITYARYDKADNWTLDLTGAYNLDN
RWQFDVNVPVVYRESTYSVSRDPTIGDVNFGIAYKFLDESATMPDAVVSV
RVKAPTGKEPFGIKLVPESLPTGNGVWSITPGLSMVKTFDPAVLFGSVSY
THNLEDSFSVNQKVGGKVRLGDSFQFGVGVAFALNERMSMSFSVSDLIQR
KSKLKPDGGWQSIVSSDANAGYFNVGMTIAASENLTIVPNLAIGMTDDAP
DFTFSLKFPYYF

Ligand information

Ligand ID

C8E

InChI

InChI=1S/C16H34O5/c1-2-3-4-5-6-7-9-18-11-13-20-15-16-21-14-12-19-10-8-17/h17H,2-16H2,1H3

InChIKey

FEOZZFHAVXYAMB-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04	O(CCCCCCCC)CCOCCOCCOCCO
CACTVS 3.341 OpenEye OEToolkits 1.5.0	CCCCCCCCOCCOCCOCCOCCO

Formula

C16 H34 O5

Name

(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE

PDB chain

5o68 Chain A Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5o68 A new class of hybrid secretion system is employed in Pseudomonas amyloid biogenesis.
Resolution	3.08 Å
Binding residue (original residue number in PDB)	F277 L282
Binding residue (residue number reindexed from 1)	F139 L144
Annotation score	1

External links

PDB	RCSB:5o68, PDBe:5o68, PDBj:5o68
PDBsum	5o68
PubMed	28811582

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