Structure of PDB 5if6 Chain C Binding Site BS01
Receptor Information
>5if6 Chain C (length=134) Species:
32630
(synthetic construct) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TQSPALIASQSLGRCTQAKDREGWLALMADDVVIETPIGKSVTNPDGSGI
KGKEAVGAFWDTHIADDRVTVTCEETFPSSSPDEIAHILVAHAEFDGGFT
SEVRGVFTYRVNKAGLITNLRGYYNLDMMTFGNQ
Ligand information
Ligand ID
3QZ
InChI
InChI=1S/C21H30O3/c1-13(22)21(24)11-8-18-16-5-4-14-12-15(23)6-9-19(14,2)17(16)7-10-20(18,21)3/h12,16-18,24H,4-11H2,1-3H3/t16-,17+,18+,19+,20+,21+/m1/s1
InChIKey
DBPWSSGDRRHUNT-CEGNMAFCSA-N
SMILES
Software
SMILES
CACTVS 3.370
CC(=O)[C@@]1(O)CC[C@H]2[C@@H]3CCC4=CC(=O)CC[C@]4(C)[C@H]3CC[C@]12C
ACDLabs 12.01
O=C1C=C4C(CC1)(C2C(C3C(C)(CC2)C(O)(C(=O)C)CC3)CC4)C
OpenEye OEToolkits 1.7.0
CC(=O)C1(CCC2C1(CCC3C2CCC4=CC(=O)CCC34C)C)O
OpenEye OEToolkits 1.7.0
CC(=O)[C@]1(CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CCC4=CC(=O)CC[C@]34C)C)O
CACTVS 3.370
CC(=O)[C]1(O)CC[CH]2[CH]3CCC4=CC(=O)CC[C]4(C)[CH]3CC[C]12C
Formula
C21 H30 O3
Name
(9beta)-17-hydroxypregn-4-ene-3,20-dione
ChEMBL
CHEMBL1062
DrugBank
DB14570
ZINC
ZINC000005434436
PDB chain
5if6 Chain C Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5if6
Sampling and energy evaluation challenges in ligand binding protein design.
Resolution
2.501 Å
Binding residue
(original residue number in PDB)
L12 A91 F107 Y124
Binding residue
(residue number reindexed from 1)
L12 A91 F107 Y124
Annotation score
1
External links
PDB
RCSB:5if6
,
PDBe:5if6
,
PDBj:5if6
PDBsum
5if6
PubMed
28980354
[
Back to BioLiP
]