Structure of PDB 5gsu Chain C Binding Site BS01
Receptor Information
>5gsu Chain C (length=106) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEI
LELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQ
AVLLPK
Ligand information
>5gsu Chain I (length=146) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcaatatccacctgcagattctaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagctgaattcagctgaacatgccttttgatggag
cagtttccaaatacacttttggtagaatctgcaggtggatattgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5gsu
Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
K15 K17 R19 R34 R44 R79
Binding residue
(residue number reindexed from 1)
K1 K3 R5 R20 R30 R65
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0030527
structural constituent of chromatin
GO:0031492
nucleosomal DNA binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0006325
chromatin organization
GO:0031507
heterochromatin formation
Cellular Component
GO:0000781
chromosome, telomeric region
GO:0000786
nucleosome
GO:0001674
female germ cell nucleus
GO:0005634
nucleus
GO:0005694
chromosome
GO:0070062
extracellular exosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5gsu
,
PDBe:5gsu
,
PDBj:5gsu
PDBsum
5gsu
PubMed
27992841
UniProt
Q96QV6
|H2A1A_HUMAN Histone H2A type 1-A (Gene Name=H2AC1)
[
Back to BioLiP
]