Structure of PDB 5f88 Chain C Binding Site BS01

Receptor Information

>5f88 Chain C (length=213) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

DILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKY
ASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGA
GTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRGA

Ligand information

>5f88 Chain F (length=12) Species: 32630 (synthetic construct) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

CQFDYSTRRLKC

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5f88 Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Resolution	2.481 Å
Binding residue (original residue number in PDB)	I10 Q38 T40 N41 G42 A84 D85 Y87 K103
Binding residue (residue number reindexed from 1)	I10 Q38 T40 N41 G42 A84 D85 Y87 K103

External links

PDB	RCSB:5f88, PDBe:5f88, PDBj:5f88
PDBsum	5f88
PubMed	27834791

[Back to BioLiP]