Structure of PDB 5bt9 Chain C Binding Site BS01
Receptor Information
>5bt9 Chain C (length=250) Species:
483179
(Brucella canis ATCC 23365) [
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EARMVANCPVLVTGGARRIGKAIVEDLASHGFPVAIHCNRSLDEGEAIAN
RINDSGGNACVVQADLEGDVRGLVKQASDRIGPIRLLVNNASLFQEDKVG
ALDMALWDRHFAVHLKTPVILAEDMRKALPEDQDGLVVNIIDQRVWKLNP
QFFSYTLSKTALWNATRTLAQALAPRIRVNAIAPGPTLPSERQRPEDFER
QVSKLPLQRAPELPEFGRTVRYFWENRSITGQMIALDGGQHLAWETPDIA
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
5bt9 Chain C Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
5bt9
Crystal structures of FolM alternative dihydrofolate reductase 1 from Brucella suis and Brucella canis.
Resolution
1.5 Å
Binding residue
(original residue number in PDB)
R23 I24 C43 N44 R45 S46 L71 E72 N95 S97 I145 K164 P189 G190 T192 L193
Binding residue
(residue number reindexed from 1)
R18 I19 C38 N39 R40 S41 L66 E67 N90 S92 I140 K159 P184 G185 T187 L188
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
R23 I145 Y160 K164
Catalytic site (residue number reindexed from 1)
R18 I140 Y155 K159
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
View graph for
Molecular Function
External links
PDB
RCSB:5bt9
,
PDBe:5bt9
,
PDBj:5bt9
PDBsum
5bt9
PubMed
34981773
UniProt
A9MA73
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