Structure of PDB 4wcx Chain C Binding Site BS01

Receptor Information
>4wcx Chain C (length=450) Species: 580331 (Thermoanaerobacter italicus Ab9) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EKADFINDEKIRQDLEKAKKATSKDALEIIEKAKNLKGITPEEAAVLLNV
EDEDLLNEMFKVARYIKEEIYGNRIVIFAPLYVSNYCVNNCRYCGYRHSN
EQQRKKLTMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIVDVIKTI
YDTKLKNGSIRRVNVNIAATTVENYKKLKKVGIGTYVLFQETYHRPTYEY
MHPQGPKHDYDYHLTAMDRAMEAGIDDVGLGVLYGLYDYKYETVAMLYHA
NHLEEKFGVGPHTISVPRLRPALNISIDKFPYIVSDKDFKKLVAVIRMAV
PYTGMILSTREKPKFREEVISIGISQISAGSCTGVGGYHEEISKRSPNEI
LRTLCEQGYLPSYCTACYRMGRTGDRFMSFAKSGQIHNFCLPNAILTFKE
FLIDYGDEKTKKIGEKAIAVNLEKIPSRTVREETKRRLTRIENGERDLYF
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain4wcx Chain C Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4wcx X-ray crystallographic and EPR spectroscopic analysis of HydG, a maturase in [FeFe]-hydrogenase H-cluster assembly.
Resolution1.59 Å
Binding residue
(original residue number in PDB)
C90 N92 C94 C97 Y99 R100 K210
Binding residue
(residue number reindexed from 1)
C87 N89 C91 C94 Y96 R97 K207
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0042364 water-soluble vitamin biosynthetic process
GO:0044272 sulfur compound biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4wcx, PDBe:4wcx, PDBj:4wcx
PDBsum4wcx
PubMed25605932
UniProtD3T7F1

[Back to BioLiP]