Structure of PDB 4txn Chain C Binding Site BS01
Receptor Information
>4txn Chain C (length=290) Species:
6183
(Schistosoma mansoni) [
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IVNSHLSELDEDVFHHFGFTTKSFDFKEKFGDVKFVCVCGSSGRIHNFAI
SMAKLAGLALPVENIAGSHARFVLYKVDHILFADHGMGIPSALIMLHEVT
KLLHYAGCKDVLFIRLGTSGGLGVKPGTIVLSDRCVNTKLEPYNELCILG
KPVRRQTIVDLNTVNELKKLSENLSLECSVVVGGTIAANDFYEEQGRLDG
SICTFSKEEKLAFLQSAYEHGIRNMEMEGTAITSHCYLTGHRAILVCVTA
VNRLEGDQITISTDEFTLFAQRPGQLVGEYLKRNNGIIVR
Ligand information
Ligand ID
URF
InChI
InChI=1S/C4H3FN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9)
InChIKey
GHASVSINZRGABV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C1=C(C(=O)NC(=O)N1)F
ACDLabs 10.04
CACTVS 3.341
FC1=CNC(=O)NC1=O
Formula
C4 H3 F N2 O2
Name
5-FLUOROURACIL
ChEMBL
CHEMBL185
DrugBank
DB00544
ZINC
ZINC000038212689
PDB chain
4txn Chain C Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
4txn
Analysis of two Schistosoma mansoni uridine phosphorylases isoforms suggests the emergence of a protein with a non-canonical function.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
S125 G126 F197 Q201 R203 M231 M233
Binding residue
(residue number reindexed from 1)
S119 G120 F191 Q195 R197 M225 M227
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.4.2.3
: uridine phosphorylase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0004850
uridine phosphorylase activity
GO:0016757
glycosyltransferase activity
GO:0042802
identical protein binding
GO:0047847
deoxyuridine phosphorylase activity
Biological Process
GO:0006218
uridine catabolic process
GO:0009116
nucleoside metabolic process
GO:0009166
nucleotide catabolic process
GO:0044206
UMP salvage
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4txn
,
PDBe:4txn
,
PDBj:4txn
PDBsum
4txn
PubMed
26898674
UniProt
G4VGI0
|UPPA_SCHMA Uridine phosphorylase A (Gene Name=UPPA)
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