Structure of PDB 4opk Chain C Binding Site BS01
Receptor Information
>4opk Chain C (length=133) Species:
86665
(Halalkalibacterium halodurans) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFL
AIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKL
VDEAEEWLNTHTYETPILKWQTDKWGEIKADYG
Ligand information
>4opk Chain D (length=12) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cgcgaautcgcg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4opk
Generating Crystallographic Models of DNA Dodecamers from Structures of RNase H:DNA Complexes.
Resolution
1.539 Å
Binding residue
(original residue number in PDB)
V72 G73 S74 N132 T183 D192
Binding residue
(residue number reindexed from 1)
V11 G12 S13 N71 T122 D131
Enzymatic activity
Enzyme Commision number
3.1.26.4
: ribonuclease H.
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0004523
RNA-DNA hybrid ribonuclease activity
View graph for
Molecular Function
External links
PDB
RCSB:4opk
,
PDBe:4opk
,
PDBj:4opk
PDBsum
4opk
PubMed
26227040
UniProt
Q9KEI9
|RNH1_HALH5 Ribonuclease H (Gene Name=rnhA)
[
Back to BioLiP
]