Structure of PDB 4k5y Chain C Binding Site BS01
Receptor Information
>4k5y Chain C (length=248) Species:
9606,10665
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HVAAIINYLGHCISLVALLVAFVLFLRARSIRCLRNIIHANLIAAFILRN
ATWFVVQLTMSPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTA
IVLTDRLRAWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWAGKRPGVYTD
YIYQGPMALVLLINFIFLFNIVRILMTKLRASTTSETIQARKAVKATLVL
LPLLGITYMLAFVNPGEDEVSRVVFIYFNAFLESFQGFFVSVFACFLN
Ligand information
Ligand ID
1Q5
InChI
InChI=1S/C21H30N2O/c1-8-18(9-2)23-19-12-16(6)22-21(17(19)7)24-20-14(4)10-13(3)11-15(20)5/h10-12,18H,8-9H2,1-7H3,(H,22,23)
InChIKey
VIZBSVDBNLAVAW-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
O(c1c(cc(cc1C)C)C)c2nc(cc(c2C)NC(CC)CC)C
OpenEye OEToolkits 1.7.6
CCC(CC)Nc1cc(nc(c1C)Oc2c(cc(cc2C)C)C)C
CACTVS 3.370
CCC(CC)Nc1cc(C)nc(Oc2c(C)cc(C)cc2C)c1C
Formula
C21 H30 N2 O
Name
3,6-dimethyl-N-(pentan-3-yl)-2-(2,4,6-trimethylphenoxy)pyridin-4-amine
ChEMBL
CHEMBL270948
DrugBank
ZINC
ZINC000014975027
PDB chain
4k5y Chain C Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
4k5y
Structure of class B GPCR corticotropin-releasing factor receptor 1.
Resolution
2.977 Å
Binding residue
(original residue number in PDB)
F203 M206 G210 L280 N283 F284 T316 L320 L323 Y327
Binding residue
(residue number reindexed from 1)
F87 M90 G94 L161 N164 F165 T197 L201 L204 Y208
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
3.2.1.17
: lysozyme.
Gene Ontology
Molecular Function
GO:0003796
lysozyme activity
GO:0004888
transmembrane signaling receptor activity
GO:0004930
G protein-coupled receptor activity
GO:0016798
hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0007166
cell surface receptor signaling pathway
GO:0007186
G protein-coupled receptor signaling pathway
GO:0009253
peptidoglycan catabolic process
GO:0016998
cell wall macromolecule catabolic process
GO:0031640
killing of cells of another organism
GO:0042742
defense response to bacterium
GO:0044659
viral release from host cell by cytolysis
Cellular Component
GO:0016020
membrane
GO:0030430
host cell cytoplasm
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4k5y
,
PDBe:4k5y
,
PDBj:4k5y
PDBsum
4k5y
PubMed
23863939
UniProt
P00720
|ENLYS_BPT4 Endolysin (Gene Name=E);
P34998
|CRFR1_HUMAN Corticotropin-releasing factor receptor 1 (Gene Name=CRHR1)
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