Structure of PDB 4j1j Chain C Binding Site BS01
Receptor Information
>4j1j Chain C (length=234) Species:
999729
(Leanyer virus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
STGPDFIYDDRPAAVSSTFNPEKGYMDFITAYGKNINADNVRIFFLNHKK
AKDSLKGSPKVEVDLQFGTLRVKVVNNHNPRNRDNPVADNAITLHRLSGY
LAKWCFDEIDHGQIEEAEVKSKVVIPLAEAKGCKWGDGVALYLAFAPGAE
MFLKDFEFYPLAIDIQRVVKDGMDITFMRKVLKQRYGTKTADDWMISEVT
AIQSAVKVVAKLPWAKAGFTAAAKNFLAKFNISV
Ligand information
>4j1j Chain H (length=17) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
accaaacaacccaccca
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4j1j
Structure of the Leanyer orthobunyavirus nucleoprotein-RNA complex reveals unique architecture for RNA encapsidation.
Resolution
2.65 Å
Binding residue
(original residue number in PDB)
R12 R84 R180
Binding residue
(residue number reindexed from 1)
R11 R83 R179
Binding affinity
PDBbind-CN
: Kd=0.505uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
Cellular Component
GO:0019013
viral nucleocapsid
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:4j1j
,
PDBe:4j1j
,
PDBj:4j1j
PDBsum
4j1j
PubMed
23569220
UniProt
F2WAD7
[
Back to BioLiP
]