Structure of PDB 4h5p Chain C Binding Site BS01

Receptor Information
>4h5p Chain C (length=244) Species: 11588 (Rift Valley fever virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DNYQELAIQFAAQAVDRNEIEQWVREFAYQGFDARRVIELLKQYGGADWE
KDAKKMIVLALTRGNKPRRMMMKMSKEGKATVEALINKYKLKEGNPSRDE
LTLSRVAAALAGRTCQALVVLSEWLPVTGTTMDGLSPAYPRHMMHPSFAG
MVDPSLPGDYLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPMN
AAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQAYKTAA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4h5p Phleboviruses encapsidate their genomes by sequestering RNA bases.
Resolution2.15 Å
Binding residue
(original residue number in PDB)		Y30 G32 F33 G65 N66 K67 R70 G95 N96 R99 S105 R106 P127 F176 V179 I180 N181 T195 Q198 P199 A202 A203
Binding residue
(residue number reindexed from 1)		Y29 G31 F32 G64 N65 K66 R69 G94 N95 R98 S104 R105 P126 F175 V178 I179 N180 T194 Q197 P198 A201 A202
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0042802 identical protein binding
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019028 viral capsid
GO:0030430 host cell cytoplasm
GO:0042025 host cell nucleus
GO:0044172 host cell endoplasmic reticulum-Golgi intermediate compartment
GO:0044177 host cell Golgi apparatus
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4h5p, PDBe:4h5p, PDBj:4h5p
PDBsum4h5p
PubMed23129612
UniProtD3K5I7|NCAP_RVFV Nucleoprotein (Gene Name=N)

[Back to BioLiP]