Structure of PDB 4fsj Chain C Binding Site BS01

Receptor Information
>4fsj Chain C (length=309) Species: 12287 (Flock House virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ALTRLSQPGLAFLKCAFAPPDFNTDPGKGIPDRFEGKVVSRKDVLNQSIS
FTAGQDTFILIAPTPGVAYWSASVPAGTFPTSATTFNPVNYPGFTSMFGT
TSTSRSDQVSSFRYASMNVGIYPTSNLMQFAGSITVWKCPVKLSTVQFPV
ATDPATSSLVHTLVGLDGVLAVGPDNFSESFIKGVFSQSACNEPDFEFND
ILEGIQTLPPANVSLGSTGQPFTMDSGAEATSGVVGWGNMDTIVIRVSAP
EGAVNSAILKAWSCIEYRPNPNAMLYQFGHDSPPLDEVALQEYRTVARSL
PVAVIAAQN
Ligand information
>4fsj Chain F (length=19) Species: 12287 (Flock House virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ASMWERVKSIIKSSLAAAS
Receptor-Ligand Complex Structure
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PDB4fsj Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides
Resolution3.5 Å
Binding residue
(original residue number in PDB)		A55 L56 R58 K68 F71 D75 F76 F240 S353 L354 Q362 N363
Binding residue
(residue number reindexed from 1)		A1 L2 R4 K14 F17 D21 F22 F186 S299 L300 Q308 N309
Enzymatic activity
Enzyme Commision number 3.4.23.44: nodavirus endopeptidase.
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:4fsj, PDBe:4fsj, PDBj:4fsj
PDBsum4fsj
PubMed
UniProtP12870|CAPSD_FHV Capsid protein alpha (Gene Name=alpha)

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