Structure of PDB 4dkw Chain C Binding Site BS01

Receptor Information
>4dkw Chain C (length=194) Species: 10754 (Lederbergvirus P22) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWDKD
ADVFYLARVWKKSENTAVQAWGAVKSWANKIPVAWPHDGHQHEKGGGEQL
KTQYADAGFSMLPDHATFPDGGNSVESGISELRDLMLEGRFKVFNTCEPF
FEEFRLYHRDENGKIVKTNDDVLDATRYGYMMRRFARMMRDIRK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain4dkw Chain C Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4dkw Structure of p22 headful packaging nuclease.
Resolution2.02 Å
Binding residue
(original residue number in PDB)
D321 D459
Binding residue
(residue number reindexed from 1)
D33 D171
Annotation score4
Enzymatic activity
Enzyme Commision number 3.1.21.-
3.6.4.-
External links
PDB RCSB:4dkw, PDBe:4dkw, PDBj:4dkw
PDBsum4dkw
PubMed22715098
UniProtP26745|TERL_BPP22 Terminase, large subunit (Gene Name=2)

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