Structure of PDB 4biz Chain C Binding Site BS01
Receptor Information
>4biz Chain C (length=239) Species:
83333
(Escherichia coli K-12) [
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EFLAAGASFNQMVTALERMMTSQQRLLSDISEELRTPLTRLQLGTALLRR
RSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSE
VLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSH
TKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGG
TGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4biz Chain C Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
4biz
Crystal Structures of Cpxahdc
Resolution
2.65 Å
Binding residue
(original residue number in PDB)
N360 R363 Y364 V391 I399 R405 T406 A409 G416 G418 G420 L421 L445
Binding residue
(residue number reindexed from 1)
N144 R147 Y148 V175 I183 R189 T190 A193 G200 G202 G204 L205 L229
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.7.13.3
: histidine kinase.
Gene Ontology
Molecular Function
GO:0000155
phosphorelay sensor kinase activity
GO:0016772
transferase activity, transferring phosphorus-containing groups
Biological Process
GO:0007165
signal transduction
GO:0016310
phosphorylation
Cellular Component
GO:0016020
membrane
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Molecular Function
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Cellular Component
External links
PDB
RCSB:4biz
,
PDBe:4biz
,
PDBj:4biz
PDBsum
4biz
PubMed
UniProt
P0AE82
|CPXA_ECOLI Sensor histidine kinase CpxA (Gene Name=cpxA)
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