Structure of PDB 3s6x Chain C Binding Site BS01

Receptor Information
>3s6x Chain C (length=291) Species: 10886 (Mammalian orthoreovirus 3 Dearing) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLNQGVTSAGAPLSIRNNRMTMGLNDGLTLSGNNLAIRLPGNTGLNIQNG
GLQFRFNTDQFQIVNNNLTLKTTVFDSINSRIGAIEQSYVASAVTPLRLN
SSTKVLDMLIDSSTLEINSSGQLTVRSTSPNLRYPIADVSGGIGMSPNYR
FRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGG
DLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQYMSK
NLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain3s6x Chain F Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3s6x Crystal structure of reovirus attachment protein sigma1 in complex with sialylated oligosaccharides
Resolution2.25 Å
Binding residue
(original residue number in PDB)		S195 G196
Binding residue
(residue number reindexed from 1)		S31 G32
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0007155 cell adhesion
GO:0019058 viral life cycle
GO:0019062 virion attachment to host cell

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Molecular Function
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Biological Process
External links
PDB RCSB:3s6x, PDBe:3s6x, PDBj:3s6x
PDBsum3s6x
PubMed21829363
UniProtP03528|SIGM1_REOVD Outer capsid protein sigma-1 (Gene Name=S1)

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