Structure of PDB 3s0p Chain C Binding Site BS01

Receptor Information
>3s0p Chain C (length=124) Species: 4081 (Solanum lycopersicum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYG
DTTNGCMSTGAHFNPAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGR
ALVVHELEDAGGRLACGVVGLTPI
Ligand information
Ligand IDCU
InChIInChI=1S/Cu/q+2
InChIKeyJPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Cu+2]
CACTVS 3.341[Cu++]
FormulaCu
NameCOPPER (II) ION
ChEMBL
DrugBankDB14552
ZINC
PDB chain3s0p Chain C Residue 155 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3s0p Biophysical properties of Tomato Chloroplast SOD
Resolution3.0 Å
Binding residue
(original residue number in PDB)
H46 H48 H120
Binding residue
(residue number reindexed from 1)
H45 H47 H105
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) H46 H48 H63 D83 H120 R143
Catalytic site (residue number reindexed from 1) H45 H47 H62 D68 H105 R113
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0005507 copper ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3s0p, PDBe:3s0p, PDBj:3s0p
PDBsum3s0p
PubMed
UniProtP14831|SODCP_SOLLC Superoxide dismutase [Cu-Zn], chloroplastic (Gene Name=SODCP.2)

[Back to BioLiP]