Structure of PDB 3qo6 Chain C Binding Site BS01

Receptor Information
>3qo6 Chain C (length=328) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
STPKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGS
GFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLR
IDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREI
SSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASS
GVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVL
DAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQ
CKVGDEVTVEVLRGDHKEKISVTLEPKP
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3qo6 Structural adaptation of the plant protease Deg1 to repair photosystem II during light exposure.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		H173 P279 S282 A299 I300 Y301
Binding residue
(residue number reindexed from 1)		H65 P171 S174 A191 I192 Y193
Enzymatic activity
Enzyme Commision number 3.4.21.-
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3qo6, PDBe:3qo6, PDBj:3qo6
PDBsum3qo6
PubMed21532594
UniProtO22609|DEGP1_ARATH Protease Do-like 1, chloroplastic (Gene Name=DEGP1)

[Back to BioLiP]