Structure of PDB 3q1o Chain C Binding Site BS01

Receptor Information

>3q1o Chain C (length=301) Species: 210 (Helicobacter pylori) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SLSSPNLSFYYNECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRF
RPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDN
AALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNALLESHIIVELIKI
LSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGL
VASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSA
KNSFVNLLGLERANNYAQTLKTEVLNDLDALKPAYPLLQENLNALLNTLF
K

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

3q1o Chain C Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3q1o Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Resolution	2.4 Å
Binding residue (original residue number in PDB)	D92 D98
Binding residue (residue number reindexed from 1)	D93 D99
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0004659	prenyltransferase activity
GO:0016740	transferase activity
GO:0046872	metal ion binding

	Biological Process
GO:0008299	isoprenoid biosynthetic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:3q1o, PDBe:3q1o, PDBj:3q1o
PDBsum	3q1o
PubMed	23493556
UniProt	O25583

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