Structure of PDB 3pzl Chain C Binding Site BS01

Receptor Information
>3pzl Chain C (length=290) Species: 273116 (Thermoplasma volcanium GSS1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ASELRSIFSLKKIADAVNGYEEAKYVVFGIPFDNTSSYRRGSKYAPDSIR
GAYVNLESYEYSYGIDLLASGMADLGDMEESEDVEYVIDTVESVVSAVMS
DGKIPIMLGGEHSITVGAVRALPKDVDLVIVDAHSDFRSSYMGNKYNHAC
VTRRALDLLGEGRITSIGIRSVSREEFEDPDFRKVSFISSFDVKKNGIDK
YIEEVDRKSRRVYISVDMDGIDPAYAPAVGTPEPFGLADTDVRRLIERLS
YKAVGFDIVEFSPLYDNGNTSMLAAKLLQVFIASREKYYK
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain3pzl Chain C Residue 314 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3pzl The crystal structure of agmatine ureohydrolase of Thermoplasma volcanium
Resolution2.7 Å
Binding residue
(original residue number in PDB)		D144 H146 D229 D231
Binding residue
(residue number reindexed from 1)		D132 H134 D217 D219
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) H124 D144 H146 D148 H160 D229 D231 E272
Catalytic site (residue number reindexed from 1) H112 D132 H134 D136 H148 D217 D219 E260
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0008783 agmatinase activity
GO:0016787 hydrolase activity
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
GO:0046872 metal ion binding
Biological Process
GO:0033389 putrescine biosynthetic process from arginine, using agmatinase

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Molecular Function
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Biological Process
External links
PDB RCSB:3pzl, PDBe:3pzl, PDBj:3pzl
PDBsum3pzl
PubMed
UniProtQ97BB8

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