Structure of PDB 3j16 Chain C Binding Site BS01

Receptor Information
>3j16 Chain C (length=226) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVF
KISGGNDKQGFPMKQGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRGA
IVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKE
DDVRDFVIRREVTKGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQA
QREAAAEYAQLLAKRLSERKAEKAEI
Ligand information
>3j16 Chain J (length=233) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cucaaagauuaagccaugugguaauucuaauccaaggaaagcaggcgcgc
aaauuacccaauccuaauucagggagguagugaggagggcaagucuggug
ccagcagccgcgguaauuccagcuccugcggcuuaauuugacucaacacg
gggaaacucaccugguggugcauggcaggucugugaugcccuuacacacc
gcccgucgcuaguacuaaaagucguaacaaggu
.....<......<<<.<<.<<.....>>..<<....>>...>>>>>....
.....<<<....<<<.....>>>..>>>..>..<<<((......<<<<..
...<<..))>>.......>>>>.>>>............<<........>>
.............<<.<<<..<<.<....>.....>>>>>>>........
...<<.<..<<<..>>>...>.>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3j16 Structural basis of highly conserved ribosome recycling in eukaryotes and archaea.
Resolution7.2 Å
Binding residue
(original residue number in PDB)		K2 N4 Q13 K14 T15 N56 Q59 G60 F61 R72 K74 C83 Y84 R85 R87 K95 S96 V108
Binding residue
(residue number reindexed from 1)		K2 N4 Q13 K14 T15 N56 Q59 G60 F61 R72 K74 C83 Y84 R85 R87 K95 S96 V108
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006364 rRNA processing
GO:0006412 translation
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:0032040 small-subunit processome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3j16, PDBe:3j16, PDBj:3j16
PDBsum3j16
PubMed22358840
UniProtP0CX37|RS6A_YEAST Small ribosomal subunit protein eS6A (Gene Name=RPS6A)

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