Structure of PDB 3itb Chain C Binding Site BS01
Receptor Information
>3itb Chain C (length=347) Species:
562
(Escherichia coli) [
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VEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALK
ADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQ
SGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQF
STARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNV
DGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWG
FRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLK
ASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGG
Ligand information
>3itb Chain L (length=6) Species:
32630
(synthetic construct) [
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gAEKAA
Receptor-Ligand Complex Structure
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PDB
3itb
Crystal structures of penicillin-binding protein 6 from Escherichia coli.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
A39 S40 G81 S82 S83 S106 G148 R194 T210 G211 T212
Binding residue
(residue number reindexed from 1)
A34 S35 G76 S77 S78 S101 G143 R189 T205 G206 T207
Enzymatic activity
Enzyme Commision number
3.4.16.4
: serine-type D-Ala-D-Ala carboxypeptidase.
Gene Ontology
Molecular Function
GO:0004180
carboxypeptidase activity
GO:0008233
peptidase activity
GO:0008658
penicillin binding
GO:0009002
serine-type D-Ala-D-Ala carboxypeptidase activity
GO:0042803
protein homodimerization activity
Biological Process
GO:0006508
proteolysis
GO:0008360
regulation of cell shape
GO:0009252
peptidoglycan biosynthetic process
GO:0009410
response to xenobiotic stimulus
GO:0071555
cell wall organization
Cellular Component
GO:0005886
plasma membrane
GO:0030288
outer membrane-bounded periplasmic space
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Cellular Component
External links
PDB
RCSB:3itb
,
PDBe:3itb
,
PDBj:3itb
PDBsum
3itb
PubMed
19807181
UniProt
P08506
|DACC_ECOLI D-alanyl-D-alanine carboxypeptidase DacC (Gene Name=dacC)
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