Structure of PDB 3iq6 Chain C Binding Site BS01
Receptor Information
>3iq6 Chain C (length=106) Species:
562
(Escherichia coli) [
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ADLEDNMETLNDNLKVIEKADNAAQVKDALTKMAAAAADAWSATPPKLED
KSPDSPEMHDFRHGFWILIGQIHDALHLANEGKVKEAQAAAEQLKCTCNA
CHQKYR
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
3iq6 Chain C Residue 150 [
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Receptor-Ligand Complex Structure
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PDB
3iq6
Evolution of metal selectivity in templated protein interfaces.
Resolution
2.35 Å
Binding residue
(original residue number in PDB)
E4 M7 E8 L10 N11 P46 F61 F65 C98 C101 H102 R106
Binding residue
(residue number reindexed from 1)
E4 M7 E8 L10 N11 P46 F61 F65 C98 C101 H102 R106
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0009055
electron transfer activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0022900
electron transport chain
Cellular Component
GO:0042597
periplasmic space
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3iq6
,
PDBe:3iq6
,
PDBj:3iq6
PDBsum
3iq6
PubMed
20515031
UniProt
P0ABE7
|C562_ECOLX Soluble cytochrome b562 (Gene Name=cybC)
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