Structure of PDB 3ik5 Chain C Binding Site BS01
Receptor Information
>3ik5 Chain C (length=117) Species:
388909
(Simian immunodeficiency virus - cpz) [
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VSVRPKVPLRTMSYKLAIDMSHFIKEKGGLEGIYYSARRHRILDIYLEKE
EGIIPDWQDYTSGPGIRYPKTFGWLWKLVPVNTSQWDDPWGEVLAWKFDP
TLAYTYEAYVRYPEEFG
Ligand information
>3ik5 Chain D (length=15) Species:
9606
(Homo sapiens) [
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AYQQGQNQLYNELNL
Receptor-Ligand Complex Structure
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PDB
3ik5
Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
Resolution
2.05 Å
Binding residue
(original residue number in PDB)
R103 G128 I132 R137 R138 I141 Y145 E149
Binding residue
(residue number reindexed from 1)
R4 G29 I33 R38 R39 I42 Y46 E50
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005525
GTP binding
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Molecular Function
External links
PDB
RCSB:3ik5
,
PDBe:3ik5
,
PDBj:3ik5
PDBsum
3ik5
PubMed
20124696
UniProt
P31818
|NEF_SIVMA Protein Nef (Gene Name=nef)
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