Structure of PDB 3gjq Chain C Binding Site BS01
Receptor Information
>3gjq Chain C (length=140) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE
VRNKNDLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGEEGIIFGTNGPV
DLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIET
Ligand information
>3gjq Chain F (length=4) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
WEHD
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3gjq
Caspase-3 binds diverse P4 residues in peptides as revealed by crystallography and structural modeling.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
R64 H121 C163
Binding residue
(residue number reindexed from 1)
R30 H87 C129
Enzymatic activity
Catalytic site (original residue number in PDB)
T62 S63 H121 G122 C163 R164
Catalytic site (residue number reindexed from 1)
T28 S29 H87 G88 C129 R130
Enzyme Commision number
3.4.22.56
: caspase-3.
Gene Ontology
Molecular Function
GO:0004197
cysteine-type endopeptidase activity
GO:0008234
cysteine-type peptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3gjq
,
PDBe:3gjq
,
PDBj:3gjq
PDBsum
3gjq
PubMed
19283487
UniProt
P42574
|CASP3_HUMAN Caspase-3 (Gene Name=CASP3)
[
Back to BioLiP
]