Structure of PDB 2xva Chain C Binding Site BS01
Receptor Information
>2xva Chain C (length=190) Species:
511145
(Escherichia coli str. K-12 substr. MG1655) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY
DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTV
VLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKE
GELRRYYEGWERVKYNEDVGELHRTDNRIKLRFATMLARK
Ligand information
Ligand ID
SFG
InChI
InChI=1S/C15H23N7O5/c16-6(1-2-7(17)15(25)26)3-8-10(23)11(24)14(27-8)22-5-21-9-12(18)19-4-20-13(9)22/h4-8,10-11,14,23-24H,1-3,16-17H2,(H,25,26)(H2,18,19,20)/t6-,7-,8+,10+,11+,14+/m0/s1
InChIKey
LMXOHSDXUQEUSF-YECHIGJVSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)C[C@H](CC[C@@H](C(=O)O)N)N)O)O)N
OpenEye OEToolkits 1.7.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CC(CCC(C(=O)O)N)N)O)O)N
CACTVS 3.370
N[CH](CC[CH](N)C(O)=O)C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23
CACTVS 3.370
N[C@@H](CC[C@H](N)C(O)=O)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23
ACDLabs 12.01
O=C(O)C(N)CCC(N)CC3OC(n2cnc1c(ncnc12)N)C(O)C3O
Formula
C15 H23 N7 O5
Name
SINEFUNGIN;
ADENOSYL-ORNITHINE
ChEMBL
CHEMBL1214186
DrugBank
DB01910
ZINC
ZINC000004217451
PDB chain
2xva Chain C Residue 1197 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2xva
Structure and Mechanism of the Chalcogen Detoxifying Protein Tehb from Escherichia Coli.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
G38 G40 R43 N44 D59 K60 D86 L87 T102 V103 V104 L108
Binding residue
(residue number reindexed from 1)
G35 G37 R40 N41 D56 K57 D83 L84 T99 V100 V101 L105
Annotation score
3
Enzymatic activity
Enzyme Commision number
2.1.1.265
: tellurite methyltransferase.
Gene Ontology
Molecular Function
GO:0008168
methyltransferase activity
GO:0008757
S-adenosylmethionine-dependent methyltransferase activity
Biological Process
GO:0009636
response to toxic substance
GO:0032259
methylation
GO:0046677
response to antibiotic
GO:0046690
response to tellurium ion
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:2xva
,
PDBe:2xva
,
PDBj:2xva
PDBsum
2xva
PubMed
21244361
UniProt
P25397
|TEHB_ECOLI Tellurite methyltransferase (Gene Name=tehB)
[
Back to BioLiP
]