Structure of PDB 2pe5 Chain C Binding Site BS01
Receptor Information
>2pe5 Chain C (length=328) Species:
562
(Escherichia coli) [
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KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNR
VAQQLAGKQLLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVER
SGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVS
DQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGW
HKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMAL
GAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSV
DRLLQLSQGQAVKGNQLLPVSLVKRKTT
Ligand information
>2pe5 Chain F (length=17) [
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aattgtgagcgctcaca
Receptor-Ligand Complex Structure
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PDB
2pe5
Structural analysis of lac repressor bound to allosteric effectors
Resolution
3.5 Å
Binding residue
(original residue number in PDB)
T5 L6 Q18 S21 Y47 N50 A53 Q54
Binding residue
(residue number reindexed from 1)
T4 L5 Q17 S20 Y46 N49 A52 Q53
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000976
transcription cis-regulatory region binding
GO:0000987
cis-regulatory region sequence-specific DNA binding
GO:0001217
DNA-binding transcription repressor activity
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0042802
identical protein binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0045892
negative regulation of DNA-templated transcription
Cellular Component
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2pe5
,
PDBe:2pe5
,
PDBj:2pe5
PDBsum
2pe5
PubMed
17543986
UniProt
P03023
|LACI_ECOLI Lactose operon repressor (Gene Name=lacI)
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