Structure of PDB 2j41 Chain C Binding Site BS01

Receptor Information
>2j41 Chain C (length=174) Species: 1280 (Staphylococcus aureus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVD
YFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEI
EVEGAKQVRKKFPDALFIFLAPPSQSRINEARKEVEMMNLYDYVVVNDEV
ELAKNRIQCIVEAEHLKRERVEAK
Ligand information
Ligand IDK
InChIInChI=1S/K/q+1
InChIKeyNPYPAHLBTDXSSS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[K+]
FormulaK
NamePOTASSIUM ION
ChEMBLCHEMBL1233793
DrugBankDB01345
ZINC
PDB chain2j41 Chain C Residue 1199 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2j41 Structure of Staphylococcus Aureus Guanylate Monophosphate Kinase
Resolution1.9 Å
Binding residue
(original residue number in PDB)
Y36 S39 E103
Binding residue
(residue number reindexed from 1)
Y32 S35 E99
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.4.8: guanylate kinase.
Gene Ontology
Molecular Function
GO:0004385 guanylate kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
Biological Process
GO:0006163 purine nucleotide metabolic process
GO:0016310 phosphorylation
GO:0046037 GMP metabolic process
GO:0046710 GDP metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2j41, PDBe:2j41, PDBj:2j41
PDBsum2j41
PubMed17012781
UniProtQ5HGM3|KGUA_STAAC Guanylate kinase (Gene Name=gmk)

[Back to BioLiP]