Structure of PDB 2ahr Chain C Binding Site BS01
Receptor Information
>2ahr Chain C (length=256) Species:
160490
(Streptococcus pyogenes M1 GAS) [
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MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMS
HQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVG
QDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDI
SEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLA
SASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTI
DKAKSL
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
2ahr Chain C Residue 1502 [
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Receptor-Ligand Complex Structure
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PDB
2ahr
Crystal Structures of Delta(1)-Pyrroline-5-carboxylate Reductase from Human Pathogens Neisseria meningitides and Streptococcus pyogenes
Resolution
2.15 Å
Binding residue
(original residue number in PDB)
G9 K10 M11 G30 S31 R35 H51 I65 M86 A87 A88 M109 M112
Binding residue
(residue number reindexed from 1)
G9 K10 M11 G30 S31 R35 H51 I65 M86 A87 A88 M109 M112
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.5.1.2
: pyrroline-5-carboxylate reductase.
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0004735
pyrroline-5-carboxylate reductase activity
GO:0016491
oxidoreductase activity
Biological Process
GO:0006561
proline biosynthetic process
GO:0055129
L-proline biosynthetic process
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2ahr
,
PDBe:2ahr
,
PDBj:2ahr
PDBsum
2ahr
PubMed
16233902
UniProt
Q9A1S9
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